Genome of Methanocaldococcus (Methanococcus) jannaschii. Graham DE, Kyrpides N, Anderson IJ, Overbeek R, Whitman WB. Methods Enzymol. 2001; 330: 40-123.
Archaeal shikimate kinase, a new member of the GHMP-kinase family. Matthew Daugherty, Veronika Vonstein, Ross Overbeek, and Andrei Osterman. J Bacteriol. 2001 Jan; 183(1): 292-300.
Genomes OnLine Database (GOLD): A monitor of genome projects world-wide. Bernal A, Ear U, Kyrpides N. Nucleic Acids Res. 2001 Jan 1; 29(1): 126-7.
Pro-Frame: similarity-based gene recognition in eukaryotic DNA sequences with errors. Mironov AA, Novichkov PS, Gelfand MS. Bioinformatics. 2001 Jan; 17(1): 13-5.
Structural and functional features of the intracellular amino terminus of DEG/ENaC ion channels. Tavernarakis N, Everett JK, Kyrpides NC, Driscoll M. Curr Biol. 2001 Mar 20; 11(6): R205-8.
Cross-talk between catalytic and regulatory elements in a DEAD motor domain is essential for SecA function. Sianidis G, Karamanou S, Vrontou E, Boulias K, Repanas K, Kyrpides N, Politou AS, Economou A. EMBO J. 2001 Mar 1; 20(5): 961-70.
Metabolic modeling of microbial strains in silico. Covert MW, Schilling CH, Famili I, Edwards JS, Goryanin II, Selkov E, Palsson BO. Trends Biochem Sci. 2001 Mar; 26(3): 179-86.
Comparative approach to analysis of regulation in complete genomes: Multidrug resistance systems in gamma-proteobacteria. Rodionov DA, Gelfand MS, Mironov AA, Rakhmaninova AB. J Mol Microbiol Biotechnol. 2001 Apr; 3(2): 319-24.
Structural basis for the catalysis and substrate specificity of homoserine kinase. Krishna SS, Zhou T, Daugherty M, Osterman A, Zhang H. Biochemistry. 2001 Sep 11; 40(36): 10810-8.
Gene recognition in eukaryotic DNA by comparison of genomic sequences. Novichkov PS, Gelfand MS, Mironov AA. Bioinformatics. 2001 Nov; 17(11): 1011-8.
Transcriptional regulation of pentose utilisation systems in the Bacillus/Clostridium group of bacteria. Rodionov DA, Mironov AA, Gelfand MS. FEMS Microbiol Lett. 2001 Dec 18; 205(2): 305-14.
Computational analysis of the transcriptional regulation of pentose utilization systems in the gamma subdivision of Proteobacteria. Laikova ON, Mironov AA, Gelfand MS. FEMS Microbiol Lett. 2001 Dec 18; 205(2): 315-22.
Comparative analysis of FUR regulons in gamma-proteobacteria. Panina EM, Mironov AA, Gelfand MS. Nucleic Acids Res. 2001 Dec 15;29(24):5195-206.
