| Domain |
ORG |
Genome Name |
Last Updated |
|
B
|
AFE
|
Acidimicrobium ferrooxidans DSM 10331
|
12/04/09
|
|
B
|
ACR
|
Acidiphilium cryptum JF-5
|
07/06/07
|
|
B
|
FEA
|
Acidithiobacillus ferrooxidans ATCC 53993
|
10/17/08
|
|
B
|
AEL
|
Acidobacterium sp. Ellin345
|
09/07/06
|
|
B
|
ACE
|
Acidothermus cellulolyticus 11B, ATCC 43068
|
03/18/06
|
|
B
|
AAV
|
Acidovorax avenae subsp. citrulli AAC00-1
|
12/22/06
|
|
B
|
ACI
|
Acidovorax sp. JS42
|
02/26/07
|
|
A
|
AIB
|
Aciduliprofundum boonei T469
|
03/31/10
|
|
B
|
ASU
|
Actinobacillus succinogenes 130Z
|
10/07/05
|
|
B
|
AMM
|
Actinosynnema mirum DSM 43827
|
12/04/09
|
|
B
|
AMU
|
Akkermansia muciniphila ATCC BAA-835
|
06/20/08
|
|
B
|
AAI
|
Alicyclobacillus acidocaldarius acidocaldarius DSM 446
|
01/06/10
|
|
B
|
AER
|
Alkalilimnicola ehrlichei MLHE-1
|
11/10/06
|
|
B
|
AMT
|
Alkaliphilus metalliredigens QYMF
|
03/18/06
|
|
B
|
AOE
|
Alkaliphilus oremlandii OhILAs
|
10/26/07
|
|
B
|
AOL
|
Aminobacterium colombiense DSM 12261
|
06/02/10
|
|
B
|
ADY
|
Ammonifex degensii KC4
|
01/29/10
|
|
B
|
AVA
|
Anabaena variabilis ATCC 29413
|
07/29/05
|
|
B
|
ATH
|
Anaerocellum thermophilum DSM 6725
|
03/22/09
|
|
B
|
APR
|
Anaerococcus prevotii DSM 20548
|
12/23/09
|
|
B
|
ADH
|
Anaeromyxobacter dehalogenans 2CP-1
|
02/19/09
|
|
B
|
ADE
|
Anaeromyxobacter dehalogenans 2CP-C
|
10/12/06
|
|
B
|
ANA
|
Anaeromyxobacter sp. K
|
09/19/08
|
|
A
|
ARP
|
Archaeoglobus profundus DSM 5631
|
03/31/10
|
|
B
|
ACH
|
Arthrobacter chlorophenolicus A6
|
02/19/09
|
|
B
|
ART
|
Arthrobacter sp. FB24
|
01/02/07
|
|
B
|
AMX
|
Arthrospira maxima CS-328
|
03/22/09
|
|
B
|
APV
|
Atopobium parvulum DSM 20469
|
12/23/09
|
|
B
|
AV
|
Azotobacter vinelandii DJ
|
01/31/05
|
|
B
|
BAR
|
Bacillus anthracis str. Sterne
|
07/12/05
|
|
B
|
BSC
|
Bacillus cereus E33L
|
03/22/07
|
|
B
|
BCS
|
Bacillus cereus subsp. cytotoxis NVH 391-98
|
06/24/06
|
|
B
|
BCG
|
Bacillus coagulans 36D1
|
03/24/07
|
|
B
|
BSE
|
Bacillus selenitireducens MLS10
|
09/12/08
|
|
B
|
BTN
|
Bacillus thuringiensis Al Hakam
|
06/24/06
|
|
B
|
BTR
|
Bacillus thuringiensis serovar konkukian str. 97-27
|
03/02/05
|
|
B
|
BTS
|
Bacillus tusciae DSM 2912
|
09/03/10
|
|
B
|
BWE
|
Bacillus weihenstephanensis KBAB4
|
02/29/08
|
|
B
|
BIN
|
Beijerinckia indica subsp. indica ATCC 9039
|
06/01/08
|
|
B
|
BCV
|
Beutenbergia cavernosae HKI 0122 DSM 12333
|
10/20/08
|
|
B
|
BLN
|
Bifidobacterium longum DJO10A
|
07/01/08
|
|
B
|
BLP
|
Bifidobacterium longum subsp. infantis ATCC 15697
|
02/04/09
|
|
B
|
BFA
|
Brachybacterium faecium DSM 4810
|
01/06/10
|
|
B
|
BMD
|
Brachyspira murdochii str. 56-150 DSM 12563
|
10/20/08
|
|
B
|
BBT
|
Bradyrhizobium sp. BTAi1
|
07/06/07
|
|
B
|
BNI
|
Brucella canis ATCC 23365
|
01/13/08
|
|
B
|
BMF
|
Brucella melitensis ATCC 23457
|
04/18/09
|
|
B
|
BRU
|
Brucella suis ATCC 23445
|
01/13/08
|
|
B
|
BAQ
|
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)
|
02/04/09
|
|
B
|
BAM
|
Burkholderia ambifaria AMMD
|
11/23/06
|
|
B
|
BCF
|
Burkholderia ambifaria MC40-6
|
04/17/08
|
|
B
|
BCN
|
Burkholderia cenocepacia AU 1054
|
09/07/06
|
|
B
|
BCO
|
Burkholderia cenocepacia HI2424
|
01/02/07
|
|
B
|
BCD
|
Burkholderia cenocepacia MC0-3
|
04/17/08
|
|
B
|
BMU
|
Burkholderia multivorans ATCC 17616
|
08/27/08
|
|
B
|
BPY
|
Burkholderia phymatum STM815
|
07/02/08
|
|
B
|
BPH
|
Burkholderia phytofirmans PsJN
|
11/12/08
|
|
B
|
BUB
|
Burkholderia sp. CCGE1002
|
09/03/10
|
|
B
|
BUS
|
Burkholderia strain 383, ATCC 17760
|
12/06/05
|
|
B
|
BVI
|
Burkholderia vietnamiensis strain G4, ATCC 53617
|
04/20/07
|
|
B
|
BU
|
Burkholderia xenovorans LB400
|
05/01/06
|
|
B
|
CSC
|
Caldicellulosiruptor saccharolyticus DSM 8903
|
03/18/06
|
|
A
|
CMA
|
Caldivirga maquilingensis IC-167, ATCC 700844, DSM 13496
|
11/26/07
|
|
B
|
CAC
|
Candidatus Accumulibacter phosphatis clade IIA str. UW-1
|
12/23/09
|
|
B
|
CAM
|
Candidatus Amoebophilus asiaticus 5a2
|
08/05/08
|
|
B
|
CDE
|
Candidatus Desulfococcus oleovorans Hxd3
|
11/26/07
|
|
B
|
CDS
|
Candidatus Desulforudis audaxviator MP104C
|
04/01/08
|
|
A
|
CKC
|
Candidatus Korarchaeum cryptofilum OPF8
|
04/02/08
|
|
B
|
CKI
|
Candidatus Koribacter versatilis Ellin345 (JGI)
|
10/26/09
|
|
A
|
CME
|
Candidatus Methanoregula boonei 6A8
|
11/21/08
|
|
A
|
CMP
|
Candidatus Methanosphaerula palustris E1-9c
|
02/07/09
|
|
B
|
CRU
|
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)
|
01/30/07
|
|
B
|
CSM
|
Candidatus Sulcia muelleri DMIN
|
06/02/10
|
|
B
|
COC
|
Capnocytophaga ochracea DSM 7271
|
12/23/09
|
|
B
|
CAI
|
Catenulispora acidiphila DSM 44928
|
12/23/09
|
|
B
|
CSS
|
Caulobacter segnis ATCC 21756
|
09/03/10
|
|
B
|
CAL
|
Caulobacter sp. K31
|
04/14/08
|
|
B
|
CPV
|
Chlorobaculum parvum NCIB 8327
|
08/06/08
|
|
B
|
CCH
|
Chlorobium chlorochromatii CaD3
|
09/06/05
|
|
B
|
CLI
|
Chlorobium limicola DSM 245
|
11/12/08
|
|
B
|
CLT
|
Chlorobium luteolum DSM 273
|
12/23/09
|
|
B
|
CPH
|
Chlorobium phaeobacteroides BS1
|
07/02/08
|
|
B
|
CPO
|
Chlorobium phaeobacteroides DSM 266
|
01/30/07
|
|
B
|
CVT
|
Chlorobium vibrioforme f. thiosulfatophilum
|
08/26/05
|
|
B
|
CAG
|
Chloroflexus aggregans DSM 9485
|
02/19/09
|
|
B
|
CAU
|
Chloroflexus aurantiacus J-10-f1
|
03/10/08
|
|
B
|
CHL
|
Chloroflexus sp. Y-400-fl
|
03/22/09
|
|
B
|
CTL
|
Chloroherpeton thalassium ATCC 35110
|
08/06/08
|
|
B
|
CSA
|
Chromohalobacter salexigens DSM3043
|
05/01/06
|
|
B
|
CBE
|
Clostridium beijerinckii NCIMB 8052
|
07/06/07
|
|
B
|
CBJ
|
Clostridium botulinum A str. ATCC 19397
|
04/17/08
|
|
B
|
CBI
|
Clostridium botulinum A str. Hall
|
04/17/08
|
|
B
|
CBM
|
Clostridium botulinum A2 str. Kyoto (JGI)
|
06/18/09
|
|
B
|
CBG
|
Clostridium botulinum A3 str. Loch Maree
|
04/17/08
|
|
B
|
CBB
|
Clostridium botulinum B str. Eklund 17B
|
06/20/08
|
|
B
|
CBD
|
Clostridium botulinum B1 str. Okra
|
04/17/08
|
|
B
|
CBO
|
Clostridium botulinum Ba4 str. 657 (JGI)
|
06/18/09
|
|
B
|
CBH
|
Clostridium botulinum F str. Langeland
|
04/17/08
|
|
B
|
CCE
|
Clostridium cellulolyticum H10
|
02/19/09
|
|
B
|
CPY
|
Clostridium phytofermentans ISDg, ATCC 700394
|
12/14/07
|
|
B
|
CLO
|
Clostridium sp. OhILAs
|
07/19/06
|
|
B
|
CTH
|
Clostridium thermocellum ATCC 27405
|
03/22/07
|
|
B
|
CTS
|
Comamonas testosteroni KF-1, DSM 14576
|
03/24/07
|
|
B
|
AEP
|
Conexibacter woesei DSM 14684
|
02/17/10
|
|
B
|
CKA
|
Coraliomargarita akajimensis DSM 45221
|
06/02/10
|
|
B
|
CWA
|
Crocosphaera watsonii WH 8501
|
10/07/05
|
|
B
|
CCT
|
Cryptobacterium curtum DSM 15641
|
12/23/09
|
|
B
|
CUM
|
Cupriavidus metallidurans CH34
|
03/31/10
|
|
B
|
CYB
|
Cyanothece sp. PCC 7424
|
02/19/09
|
|
B
|
CYC
|
Cyanothece sp. PCC 7425
|
02/19/09
|
|
B
|
CYD
|
Cyanothece sp. PCC 7822
|
09/12/08
|
|
B
|
CYE
|
Cyanothece sp. PCC 8801
|
02/19/09
|
|
B
|
CYF
|
Cyanothece sp. PCC 8802
|
01/06/10
|
|
B
|
CHU
|
Cytophaga hutchinsonii ATCC-33406
|
09/06/05
|
|
B
|
DEA
|
Dechloromonas aromatica RCB
|
08/08/05
|
|
B
|
DEH
|
Dehalococcoides sp. BAV1
|
06/24/06
|
|
B
|
DEL
|
Dehalococcoides sp. GT
|
03/31/10
|
|
B
|
DAV
|
Dehalococcoides sp. VS
|
01/29/10
|
|
B
|
DGE
|
Deinococcus geothermalis, DSM11300
|
10/12/06
|
|
B
|
DAI
|
Delftia acidovorans SPH-1
|
12/14/07
|
|
B
|
DNA
|
Denitrovibrio acetiphilus DSM 12809
|
03/31/10
|
|
B
|
DAL
|
Desulfatibacillum alkenivorans AK-01
|
02/04/09
|
|
B
|
DHA
|
Desulfitobacterium hafniense DCB-2
|
02/19/09
|
|
B
|
DRT
|
Desulfohalobium retbaense DSM 5692
|
12/23/09
|
|
B
|
DBA
|
Desulfomicrobium baculatum DSM 4028
|
12/23/09
|
|
B
|
DAE
|
Desulfotomaculum acetoxidans DSM 771
|
12/23/09
|
|
B
|
DRE
|
Desulfotomaculum reducens MI-1
|
04/20/07
|
|
B
|
DDT
|
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
|
02/04/09
|
|
B
|
DDS
|
Desulfovibrio desulfuricans subsp. desulfuricans str. G20
|
01/18/06
|
|
B
|
DSA
|
Desulfovibrio salexigens DSM 2638
|
12/23/09
|
|
B
|
DVI
|
Desulfovibrio vulgaris str. 'Miyazaki F'
|
02/04/09
|
|
B
|
DVU
|
Desulfovibrio vulgaris subsp. vulgaris DP4
|
01/16/07
|
|
B
|
DAC
|
Desulfuromonas acetoxidans DSM 684
|
11/21/05
|
|
B
|
DTP
|
Diaphorobacter sp. TPSY
|
02/04/09
|
|
B
|
DDA
|
Dickeya dadantii Ech703 (JGI)
|
08/10/09
|
|
B
|
DDB
|
Dickeya zeae Ech1591 (JGI)
|
10/26/09
|
|
B
|
DTU
|
Dictyoglomus turgidum DSM 6724
|
02/04/09
|
|
B
|
DSH
|
Dinoroseobacter shibae DFL 12
|
11/26/07
|
|
B
|
DFE
|
Dyadobacter fermentans DSM 18053
|
10/27/09
|
|
B
|
ELE
|
Eggerthella lenta DSM 2243
|
10/27/09
|
|
B
|
ECA
|
Ehrlichia canis Jake strain
|
03/18/05
|
|
B
|
EMI
|
Elusimicrobium minutum Pei191
|
08/06/08
|
|
B
|
ENT
|
Enterobacter sp. 638
|
03/24/07
|
|
B
|
EFA
|
Enterococcus faecium DO
|
02/07/02
|
|
B
|
ECQ
|
Escherichia coli ATCC 8739
|
06/20/08
|
|
B
|
EOE
|
Escherichia coli BL21 (DE3)(JGI)
|
10/26/09
|
|
B
|
EXI
|
Exiguobacterium sp. 255-15
|
06/12/08
|
|
B
|
EXJ
|
Exiguobacterium sp. AT1b (JGI)
|
06/18/09
|
|
A
|
FAC
|
Ferroplasma acidarmanus fer1
|
02/14/06
|
|
B
|
FNO
|
Fervidobacterium nodosum Rt17-B1
|
04/02/07
|
|
B
|
FSU
|
Fibrobacter succinogenes subsp. succinogenes S85
|
12/23/09
|
|
B
|
FJO
|
Flavobacterium johnsoniae UW101
|
05/29/07
|
|
B
|
FPH
|
Francisella philomiragia ATCC 25017
|
04/14/08
|
|
B
|
FTJ
|
Francisella tularensis subsp. holarctica FTA
|
10/25/07
|
|
B
|
FTO
|
Francisella tularensis subsp. holarctica FTNF002-00
|
10/27/09
|
|
B
|
FTC
|
Francisella tularensis subsp. mediasiatica FSC147
|
06/20/08
|
|
B
|
FRC
|
Frankia sp. Ccl3
|
04/07/06
|
|
B
|
FRE
|
Frankia sp. EAN1pec
|
11/05/07
|
|
B
|
GSA
|
Geobacillus sp. G11MC16
|
09/12/08
|
|
B
|
GSB
|
Geobacillus sp. WCH70
|
09/12/08
|
|
B
|
GSC
|
Geobacillus sp. Y412MC10
|
01/06/10
|
|
B
|
GSD
|
Geobacillus sp. Y412MC61
|
12/23/09
|
|
B
|
GBE
|
Geobacter bemidjiensis Bem
|
09/19/08
|
|
B
|
GLO
|
Geobacter lovleyi SZ
|
07/02/08
|
|
B
|
GME
|
Geobacter metallireducens GS-15
|
05/29/07
|
|
B
|
GEO
|
Geobacter sp. FRC-32
|
02/19/09
|
|
B
|
GEP
|
Geobacter sp. M21
|
10/26/09
|
|
B
|
GUR
|
Geobacter uraniireducens Rf4
|
06/02/07
|
|
B
|
GOB
|
Geodermatophilus obscurus DSM 43160
|
10/20/08
|
|
B
|
GBR
|
Gordonia bronchialis DSM 43247
|
12/23/09
|
|
B
|
HSM
|
Haemophilus somnus 129PT
|
08/26/05
|
|
B
|
HOC
|
Haliangium ochraceum DSM 14365
|
01/06/10
|
|
A
|
HBO
|
Halogeometricum borinquense DSM 11551 ATCC 700274
|
10/20/08
|
|
A
|
HMU
|
Halomicrobium mukohataei DSM 12286
|
01/06/10
|
|
A
|
HUT
|
Halorhabdus utahensis AX-2 DSM 12940
|
01/06/10
|
|
B
|
HHA
|
Halorhodospira halophila SL1 DSM 244
|
03/22/07
|
|
A
|
HLA
|
Halorubrum lacusprofundi strain ACAM 34 ATCC 49239
|
09/12/08
|
|
A
|
HLT
|
Haloterrigena turkmenica DSM 5511
|
03/31/10
|
|
B
|
HOR
|
Halothermothrix orenii H 168
|
02/19/09
|
|
B
|
HNA
|
Halothiobacillus neapolitanus c2
|
12/23/09
|
|
B
|
HAU
|
Herpetosiphon aurantiacus ATCC 23779 DSM 785
|
11/26/07
|
|
B
|
HBA
|
Hirschia baltica ATCC 49814
|
12/04/09
|
|
B
|
HYA
|
Hydrogenobaculum sp. Y04AAS1
|
09/12/08
|
|
A
|
IHO
|
Ignicoccus hospitalis KIN4/I
|
10/25/07
|
|
B
|
JAN
|
Jannaschia sp. CCS1
|
03/18/06
|
|
B
|
JDE
|
Jonesia denitrificans strain DSM 20603
|
01/06/10
|
|
B
|
KKO
|
Kangiella koreensis SW-125 DSM 16069
|
01/06/10
|
|
B
|
KRA
|
Kineococcus radiotolerans SRS30216
|
09/12/08
|
|
B
|
KOL
|
Kosmotoga olearia TBF 19.5.1 (JGI)
|
08/10/09
|
|
B
|
KFL
|
Kribbella flavida DSM 17836
|
10/20/08
|
|
B
|
KSE
|
Kytococcus sedentarius DSM 20547
|
01/06/10
|
|
B
|
LBE
|
Lactobacillus brevis ATCC367
|
11/10/06
|
|
B
|
LBU
|
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
|
11/10/06
|
|
B
|
LGA
|
Lactobacillus gasseri ATCC-33323
|
11/10/06
|
|
B
|
LRU
|
Lactobacillus reuteri 100-23
|
05/13/06
|
|
B
|
LRF
|
Lactobacillus reuteri F275 DSM20016
|
04/07/09
|
|
B
|
LSE
|
Lactobacilus casei ATCC 334
|
11/10/06
|
|
B
|
LLA
|
Lactococcus lactis cremoris SK11
|
11/10/06
|
|
B
|
LCH
|
Leptothrix cholodnii SP-6
|
04/17/08
|
|
B
|
LBL
|
Leptotrichia buccalis DSM 1135
|
10/27/09
|
|
B
|
LMS
|
Leuconostoc mesenteroides ATCC8293
|
11/10/06
|
|
B
|
MCO
|
Magnetococcus MC-1
|
01/02/07
|
|
B
|
MMA
|
Magnetospirillum magnetotacticum MS-1
|
11/12/00
|
|
B
|
MMS
|
Maricaulis maris MCS10
|
11/02/06
|
|
B
|
MAQ
|
Marinobacter aquaeolei VT8
|
01/30/07
|
|
B
|
MAR
|
Marinomonas sp. MWYL1
|
03/24/07
|
|
B
|
MIR
|
Meiothermus ruber DSM 1279
|
03/31/10
|
|
B
|
MES
|
Mesorhizobium sp. BNC1
|
10/12/06
|
|
A
|
MSE
|
Metallosphaera sedula DSM 5348
|
03/24/07
|
|
A
|
MFE
|
Methanocaldococcus fervens AG86
|
12/23/09
|
|
A
|
MLC
|
Methanocaldococcus sp. FS406-22
|
06/02/10
|
|
A
|
MVU
|
Methanocaldococcus vulcanius M7
|
12/23/09
|
|
A
|
MBU
|
Methanococcoides burtonii DSM6242
|
05/01/06
|
|
A
|
MAE
|
Methanococcus aeolicus Nankai-3 (JGI),
|
06/21/07
|
|
A
|
MMP
|
Methanococcus maripaludis C5
|
04/02/07
|
|
A
|
MMM
|
Methanococcus maripaludis C6
|
11/20/07
|
|
A
|
MML
|
Methanococcus maripaludis C7
|
06/21/07
|
|
A
|
MVA
|
Methanococcus vannielii SB
|
03/24/07
|
|
A
|
MLA
|
Methanocorpusculum labreanum Z
|
03/12/07
|
|
A
|
MMN
|
Methanoculleus marisnigri JR1
|
03/22/07
|
|
A
|
MHM
|
Methanohalophilus mahii DSM 5219
|
06/02/10
|
|
A
|
MTM
|
Methanosaeta thermophila PT
|
01/02/07
|
|
A
|
MBA
|
Methanosarcina barkeri fusaro
|
11/08/00
|
|
A
|
MHU
|
Methanospirillum hungatei JF-1
|
06/24/06
|
|
B
|
MFA
|
Methylobacillus flagellatus KT
|
04/20/06
|
|
B
|
MCH
|
Methylobacterium chloromethanicum CM4
|
02/05/09
|
|
B
|
MQW
|
Methylobacterium extorquens PA1
|
02/11/08
|
|
B
|
MNO
|
Methylobacterium nodulans ORS 2060
|
02/05/09
|
|
B
|
MQB
|
Methylobacterium populi BJ001
|
08/06/08
|
|
B
|
MRA
|
Methylobacterium radiotolerans JCM 2831
|
04/17/08
|
|
B
|
MQA
|
Methylobacterium sp. 4-46
|
04/17/08
|
|
B
|
MPT
|
Methylobium petroleophilum strain PM1
|
04/18/05
|
|
B
|
MSL
|
Methylocella silvestris BL2
|
02/05/09
|
|
B
|
MMB
|
Methylotenera mobilis JLW8 (JGI)
|
10/26/09
|
|
B
|
MET
|
Methylovorus sp. SIP3-4 (JGI)
|
10/26/09
|
|
B
|
MLU
|
Micrococcus luteus NCTC 2665 (JGI)
|
08/10/09
|
|
B
|
MTE
|
Moorella thermoacetica
|
03/31/06
|
|
B
|
MYC
|
Mycobacterium sp. JLS
|
04/09/07
|
|
B
|
MYO
|
Mycobacterium sp. KMS
|
01/30/07
|
|
B
|
MYB
|
Mycobacterium sp. MCS
|
08/08/06
|
|
B
|
MYA
|
Mycobacterium vanbaalenii PYR-1
|
01/16/07
|
|
B
|
NAZ
|
Nakamurella multipartita DSM 44233
|
01/29/10
|
|
B
|
NTH
|
Natranaerobius thermophilus JW/NM-WN-LF
|
08/06/08
|
|
A
|
NTM
|
Natrialba magadii ATCC 43099
|
03/31/10
|
|
B
|
NHA
|
Nitrobacter hamburgensis X14
|
05/01/06
|
|
B
|
NWI
|
Nitrobacter winogradskyi Nb-255
|
11/21/05
|
|
B
|
NCH
|
Nitrosococcus halophilus Nc4
|
06/02/10
|
|
B
|
NOC
|
Nitrosococcus oceani ATCC 19707
|
04/18/06
|
|
B
|
NE
|
Nitrosomonas europaea ATCC-19178
|
05/20/02
|
|
B
|
NEU
|
Nitrosomonas eutropha C71
|
11/02/06
|
|
B
|
NMU
|
Nitrosospira multiformis Surinam
|
04/18/06
|
|
B
|
NOA
|
Nocardioides sp. JS614
|
01/30/07
|
|
B
|
NPU
|
Nostoc punctiforme ATCC-29133
|
07/02/08
|
|
B
|
SAR
|
Novosphingomonas aromaticivorans F199
|
01/17/05
|
|
B
|
OAN
|
Ochrobactrum anthropi ATCC 49188
|
12/05/07
|
|
B
|
OON
|
Oenococcus oeni PSU-1
|
11/10/06
|
|
B
|
OTE
|
Opitutus terrae PB90-1
|
05/30/08
|
|
B
|
PJD
|
Paenibacillus sp. JDR-2
|
12/23/09
|
|
B
|
PDE
|
Paracoccus denitrificans strain 1222
|
07/12/05
|
|
B
|
PLA
|
Parvibaculum lavamentivorans DS-1
|
04/29/07
|
|
B
|
PCO
|
Pectobacterium carotovorum subsp. carotovorum PC1 (JGI)
|
10/26/09
|
|
B
|
PWA
|
Pectobacterium wasabiae WPP163
|
12/23/09
|
|
B
|
PEP
|
Pediococcus pentosaceus ATCC25745
|
11/02/06
|
|
B
|
PHE
|
Pedobacter heparinus DSM 2366
|
12/23/09
|
|
B
|
PCA
|
Pelobacter carbinolicus
|
07/29/05
|
|
B
|
PPO
|
Pelobacter propionicus DSM 2379
|
01/30/07
|
|
B
|
PLT
|
Pelodictyon luteolum DSM 273
|
08/26/05
|
|
B
|
PPH
|
Pelodictyon phaeoclathratiforme BU-1
|
08/27/08
|
|
B
|
PMO
|
Petrotoga mobilis SJ95, DSM 10674
|
12/05/07
|
|
E
|
PCH
|
Phanerochaete chrysosporidium BKMF1767 (JGI)
|
01/06/03
|
|
E
|
PRA
|
Phytophthora ramorum
|
03/02/06
|
|
E
|
PSO
|
Phytophthora sojae
|
03/02/06
|
|
E
|
PSI
|
Pichia stipitis CBS 6054 (JGI)
|
09/07/07
|
|
B
|
AFZ
|
Pirellula staleyi DSM 6068
|
02/17/10
|
|
B
|
PNA
|
Polaromonas naphthalenivorans strain CJ2, ATCC BAA-779
|
02/26/07
|
|
B
|
PST
|
Polaromonas strain JS666, ATCC BAA-500
|
05/01/06
|
|
B
|
POM
|
Polynucleobacter necessarius STIR1
|
04/18/08
|
|
B
|
POL
|
Polynucleobacter sp. QLW-P1DMWA-1
|
05/29/07
|
|
B
|
CK
|
Prochlorococcus marinus MED4
|
11/05/02
|
|
B
|
PMA
|
Prochlorococcus marinus MIT9313
|
05/20/02
|
|
B
|
PMB
|
Prochlorococcus marinus str. MIT 9215
|
10/26/07
|
|
B
|
PRO
|
Prochlorococcus marinus str. MIT 9312
|
08/26/05
|
|
B
|
PMN
|
Prochlorococcus marinus str. NATL2A
|
02/26/07
|
|
B
|
PAS
|
Prosthecochloris aestuarii SK413/DSM 271
|
08/27/08
|
|
B
|
PAT
|
Pseudoalteromonas atlantica T6c
|
10/12/06
|
|
B
|
PU
|
Pseudomonas fluorescens Pf0-1
|
04/18/06
|
|
B
|
PMD
|
Pseudomonas mendocina ymp
|
04/02/07
|
|
B
|
PPT
|
Pseudomonas putida F1
|
07/06/07
|
|
B
|
PPI
|
Pseudomonas putida GB-1
|
03/15/08
|
|
B
|
PPD
|
Pseudomonas putida W619
|
08/27/08
|
|
B
|
PSY
|
Pseudomonas syringae B728a
|
06/04/05
|
|
B
|
PSB
|
Psychrobacter arcticum 273-4
|
08/23/05
|
|
B
|
PCR
|
Psychrobacter cryohalolentis K5
|
10/12/06
|
|
B
|
PPW
|
Psychrobacter sp. PRwf-1
|
07/06/07
|
|
B
|
PIN
|
Psychromonas ingrahamii 37
|
01/16/07
|
|
A
|
PAA
|
Pyrobaculum arsenaticum DSM 13514
|
05/13/07
|
|
A
|
PCL
|
Pyrobaculum calidifontis JCM 11548
|
03/24/07
|
|
B
|
PIS
|
Pyrobaculum islandicum DSM 4184
|
01/16/07
|
|
B
|
RET
|
Ralstonia eutropha JMP134
|
10/12/06
|
|
B
|
RAM
|
Ralstonia metallidurans CH34
|
05/29/03
|
|
B
|
RPJ
|
Ralstonia pickettii 12D (JGI)
|
08/10/09
|
|
B
|
RPI
|
Ralstonia pickettii 12J
|
11/12/08
|
|
B
|
RLG
|
Rhizobium leguminosarum bv. trifolii WSM1325 (JGI)
|
08/10/09
|
|
B
|
RLF
|
Rhizobium leguminosarum bv. trifolii WSM2304
|
11/27/08
|
|
B
|
RSP
|
Rhodobacter sphaeroides 2.4.1, ATCC 17025
|
03/31/06
|
|
B
|
RSH
|
Rhodobacter sphaeroides ATCC 17029
|
04/09/07
|
|
B
|
RFR
|
Rhodoferax ferrireducens DSM 15236
|
10/12/06
|
|
B
|
RPU
|
Rhodopseudomonas palustris BisA53
|
10/23/05
|
|
B
|
RPL
|
Rhodopseudomonas palustris BisB18
|
10/12/06
|
|
B
|
RPT
|
Rhodopseudomonas palustris BisB5
|
10/12/06
|
|
B
|
RPA
|
Rhodopseudomonas palustris CGA009
|
05/20/02
|
|
B
|
RPS
|
Rhodopseudomonas palustris HaA2
|
10/10/06
|
|
B
|
RPR
|
Rhodopseudomonas palustris TIE-1
|
08/06/08
|
|
B
|
RR
|
Rhodospirillum rubrum
|
08/08/05
|
|
B
|
RCD
|
Rhodothermus marinus DSM 4252
|
01/29/10
|
|
B
|
RCS
|
Roseiflexus castenholzii HLO8, DSM 13941
|
11/05/07
|
|
B
|
ROS
|
Roseiflexus sp. RS1
|
07/06/07
|
|
B
|
RXY
|
Rubrobacter xylanophilus DSM 9941
|
10/12/06
|
|
B
|
SVI
|
Saccharomonospora viridis DSM 43017
|
12/23/09
|
|
B
|
SDG
|
Saccharophagus degradans 2-40
|
10/14/06
|
|
B
|
SAO
|
Salinispora arenicola CNS205
|
11/26/07
|
|
B
|
STI
|
Salinispora tropica CNB-440
|
05/29/07
|
|
B
|
SNK
|
Sanguibacter keddieii DSM 10542
|
09/03/10
|
|
B
|
SKE
|
Sebaldella termitidis ATCC 33386
|
01/29/10
|
|
B
|
SPT
|
Serratia proteamaculans 568
|
11/05/07
|
|
B
|
SHM
|
Shewanella amazonensis SB2B
|
01/30/07
|
|
B
|
SHB
|
Shewanella baltica OS155
|
03/22/07
|
|
B
|
SHD
|
Shewanella baltica OS185
|
12/05/07
|
|
B
|
SHG
|
Shewanella baltica OS195
|
12/05/07
|
|
B
|
SHH
|
Shewanella baltica OS223
|
02/05/09
|
|
B
|
SDE
|
Shewanella denitrificans OS217
|
05/01/06
|
|
B
|
SHF
|
Shewanella frigidimarina NCIMB 400
|
09/23/05
|
|
B
|
SHO
|
Shewanella halifaxensis HAW-EB4
|
03/27/08
|
|
B
|
SPE
|
Shewanella pealeana ATCC 700345
|
11/05/07
|
|
B
|
SPC
|
Shewanella putrefaciens 200
|
04/02/07
|
|
B
|
SPU
|
Shewanella putrefaciens CN-32
|
06/04/05
|
|
B
|
SHC
|
Shewanella sediminis HAW-EB3
|
10/26/07
|
|
B
|
SHE
|
Shewanella sp. ANA-3
|
01/02/07
|
|
B
|
SHW
|
Shewanella sp. MR-4
|
11/23/06
|
|
B
|
SHL
|
Shewanella sp. MR-7
|
06/24/06
|
|
B
|
SPV
|
Shewanella sp. PV-4
|
06/04/05
|
|
B
|
SHN
|
Shewanella sp. W3-18-1
|
01/30/07
|
|
B
|
SWD
|
Shewanella woodyi ATCC 51908
|
06/12/08
|
|
B
|
SLT
|
Sideroxydans lithotrophicus ES-1
|
06/02/10
|
|
B
|
SIL
|
Silicibacter sp. TM1040
|
10/12/06
|
|
B
|
SME
|
Sinorhizobium medicae WSM419
|
10/14/06
|
|
B
|
SLI
|
Slackia heliotrinireducens DSM 20476
|
12/23/09
|
|
B
|
SUS
|
Solibacter usitatus Ellin6076
|
11/23/06
|
|
B
|
SKF
|
Sphaerobacter thermophilus DSM 20745
|
01/29/10
|
|
B
|
SWI
|
Sphingomonas wittichii RW1
|
06/20/07
|
|
B
|
SAL
|
Sphingopyxis alaskensis, strain RB2256 T
|
10/12/06
|
|
E
|
SRO
|
Sporotrichum thermophile
|
09/03/10
|
|
B
|
SKN
|
Stackebrandtia nassauensis DSM 44728
|
03/31/10
|
|
B
|
SAS
|
Staphylococcus aureus subsp. aureus JH1
|
06/09/06
|
|
B
|
SUR
|
Staphylococcus aureus subsp. aureus JH9
|
07/06/07
|
|
A
|
SMR
|
Staphylothermus marinus F1
|
03/24/07
|
|
B
|
SKH
|
Streptobacillus moniliformis DSM 12112
|
01/29/10
|
|
B
|
STP
|
Streptococcus suis str 89/1591
|
09/09/05
|
|
B
|
STE
|
Streptococcus thermophilus LMD-9
|
11/10/06
|
|
B
|
SKI
|
Streptosporangium roseum DSM 43021
|
01/29/10
|
|
A
|
SIA
|
Sulfolobus islandicus L.S.2.15 (JGI)
|
06/18/09
|
|
A
|
SIB
|
Sulfolobus islandicus M.14.25 (JGI)
|
06/18/09
|
|
A
|
SIC
|
Sulfolobus islandicus M.16.27 (JGI)
|
06/18/09
|
|
A
|
SID
|
Sulfolobus islandicus M.16.4 (JGI)
|
06/18/09
|
|
A
|
SIE
|
Sulfolobus islandicus Y.G.57.14 (JGI)
|
06/18/09
|
|
A
|
SIF
|
Sulfolobus islandicus Y.N.15.51 (JGI)
|
06/18/09
|
|
B
|
SUF
|
Sulfurihydrogenibium sp. YO3AOP1
|
06/20/08
|
|
B
|
SDN
|
Sulfurimonas denitrificans DSM 1251
|
06/20/08
|
|
B
|
SKJ
|
Sulfurospirillum deleyianum DSM 6946
|
01/29/10
|
|
B
|
SEL
|
Synechococcus elongatus PCC 7942
|
04/18/06
|
|
B
|
SYC
|
Synechococcus sp. CC9605
|
07/07/06
|
|
B
|
SYE
|
Synechococcus sp. CC9902
|
08/26/05
|
|
B
|
SN
|
Synechococcus sp. WH8102
|
03/27/02
|
|
B
|
SFU
|
Syntrophobacter fumaroxidans MPOB
|
01/02/07
|
|
B
|
SWO
|
Syntrophomonas wolfei Goettingen
|
11/05/07
|
|
E
|
FUG
|
Takifugu rubripes (JGI)
|
12/03/01
|
|
E
|
TPD
|
Thalassiosira pseudonana
|
11/12/09
|
|
B
|
TSP
|
Thauera sp. MZ1T
|
09/13/08
|
|
B
|
TAT
|
Thermanaerovibrio acidaminovorans DSM 6589
|
01/29/10
|
|
B
|
TEH
|
Thermoanaerobacter ethanolicus X514
|
02/29/08
|
|
B
|
TEI
|
Thermoanaerobacter italicus Ab9
|
03/31/10
|
|
B
|
TPS
|
Thermoanaerobacter pseudethanolicus ATCC 33223
|
02/16/08
|
|
B
|
TAU
|
Thermobaculum terrenum ATCC BAA-798
|
01/29/10
|
|
B
|
THA
|
Thermocrinis albus DSM 14484
|
09/03/10
|
|
A
|
TPE
|
Thermofilum pendens Hrk 5
|
01/30/07
|
|
B
|
TAV
|
Thermomonospora curvata DSM 43183
|
01/29/10
|
|
B
|
TFU
|
Thermomonospora fusca
|
08/13/05
|
|
B
|
TNE
|
Thermoproteus neutrophilus V24Sta
|
04/18/08
|
|
B
|
TCA
|
Thermosinus carboxydivorans Nor1
|
04/29/07
|
|
B
|
TME
|
Thermosipho melanesiensis BI429
|
04/29/07
|
|
B
|
TLE
|
Thermotoga lettingae TMO
|
11/20/07
|
|
B
|
TAW
|
Thermotoga naphthophila RKU-10
|
01/29/10
|
|
B
|
TPT
|
Thermotoga petrophila RKU-1
|
07/06/07
|
|
B
|
TMA
|
Thermotoga sp. RQ2
|
06/20/08
|
|
B
|
TAQ
|
Thermus aquaticus str Y51MC23
|
09/13/08
|
|
B
|
THI
|
Thioalkalivibrio sp. HL-EbGR7
|
02/07/09
|
|
B
|
THV
|
Thioalkalivibrio sp. K90mix
|
09/03/10
|
|
B
|
TDN
|
Thiobacillus denitrificans ATCC 25259
|
07/12/05
|
|
B
|
TCR
|
Thiomicrospira crunogena XCL-2
|
08/26/05
|
|
B
|
TMI
|
Thiomonas intermedia K12
|
09/03/10
|
|
B
|
TER
|
Trichodesmium erythraeum IMS101
|
11/23/06
|
|
B
|
TPU
|
Tsukamurella paurometabola ATCC 8368
|
10/20/08
|
|
B
|
TPM
|
Tsukamurella paurometabola DSM 20162
|
09/03/10
|
|
B
|
VPD
|
Variovorax paradoxus S110 (JGI)
|
08/10/09
|
|
B
|
VPR
|
Veillonella parvula str. Te3 DSM 2008
|
01/28/09
|
|
B
|
VEI
|
Verminephrobacter eiseniae EF01-2
|
02/26/07
|
|
B
|
VCE
|
Vibrio cholerae MJ-1236 (JGI)
|
06/18/09
|
|
B
|
VEX
|
Vibrio sp. Ex25
|
12/23/09
|
|
B
|
VVA
|
Victivallis vadensis ATCC BAA-548, DSM 14823
|
12/05/07
|
|
B
|
XAU
|
Xanthobacter autotrophicus Py2
|
06/09/06
|
|
B
|
XCE
|
Xylanimonas cellulosilytica DSM 15894
|
01/28/09
|
|
B
|
XFB
|
Xylella fastidiosa M12
|
04/17/08
|
|
B
|
XFC
|
Xylella fastidiosa M23
|
04/17/08
|
|
B
|
XFX
|
Xylella fastidiosa almond
|
07/16/01
|
|
B
|
XFY
|
Xylella fastidiosa oleander
|
07/16/01
|
|
B
|
YPT
|
Yersinia pestis Antiqua
|
09/07/06
|
|
B
|
YPI
|
Yersinia pestis Nepal516
|
09/07/06
|
|
B
|
YPP
|
Yersinia pestis Pestoides F
|
05/29/07
|
|
V
|
QGO
|
Yersinia pestis phage phiA1122
|
02/08/08
|
|
B
|
YSD
|
Yersinia pseudotuberculosis PB1/+
|
08/06/08
|
|
B
|
YSA
|
Yersinia pseudotuberculosis YPIII
|
04/01/08
|
|
B
|
ZMO
|
Zymomonas mobilis subsp. mobilis NCIB 11163
|
12/23/09
|
|
B
|
DPR
|
delta proteobacterium MLMS-1
|
08/05/06
|
