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Publicly Available Genomes

 

The contigs, DNA, and protein sequences of these genes are downloadable. The terms in under which they are made available may vary from organism to organism.

Integrated Genomics (IG) provides these genomes free to nonprofit research institutions. If you make use of this data, we would appreciate you including an appropriate acknowledgment in the publication of your results, such as including the following sentence:
"The genome data was obtained from the site www.integratedgenomics.com."

  • Xylella fastidiosa CVC (strain 9a5c)
  •   September 2002
  • Xylella fastidiosa oleander (Ann1)
  •   September 2002
  • Xylella fastidiosa almond (Dixon)
  •   September 2002
  • Methylobacterium extorquens AM1
  •   June 2002
  • Fusobacterium nucleatum vincentii ATCC 49256
  •   May 2002
  • Bacteriophage RB69
  •   April 2002
  • Rhodobacter capsulatus SB1003
  •   January 2001


    Xylella fastidiosa CVC (strain 9a5c)

    In collaboration with the Department of Energy's Joint Genome Institute (JGI) and the University of California, Berkeley.

    Integrated Genomics has published a detailed comparative genomic analysis (PNAS, Vol. 99, Issue 19, 12403-12408, Sept 2002) against the complete genome sequence of the Xylella fastidiosa CVC (strain 9a5c) that was previously published by the Organization for Nucleotide Sequencing and Analysis (Nature, 2000, 406(6792):151-7)

    We are making our updated estimates of the genes available to the community.


    Xylella fastidiosa oleander (Ann1)

    In collaboration with the Department of Energy's Joint Genome Institute (JGI) and the University of California, Berkeley.

    Integrated Genomics has published the sequence of the Xylella fastidiosa oleander (Ann1):
    PNAS, Vol. 99, Issue 19, 12403-12408, Sept 2002

    We are making our updated estimates of the genes available to the community.


    Xylella fastidiosa almond (Dixon)

    In collaboration with the Department of Energy's Joint Genome Institute (JGI) and the University of California, Berkeley.

    Integrated Genomics has published the sequence of the Xylella fastidiosa oleander (Dixon):
    PNAS, Vol. 99, Issue 19, 12403-12408, Sept 2002

    We are making our updated estimates of the genes available to the community.


    Methylobacterium extorquens AM1

    University of Washington (Dr. Mary Lidstrom) and Integrated Genomics (IG) are making the Methylobacterium extorquens AM1 "gapped" genome available for free to nonprofit research institutions. Both parties are working on a detailed metabolic reconstruction, and we intend to publish and release our entire analysis when this is completed.

    For now, we are making our preliminary estimates of the genes available to the community.


    Fusobacterium nucleatum vincentii ATCC 49256

    Integrated Genomics (IG) is making the Fusobacterium nucleatum vincentii ATCC 49256 "gapped" genome available for free to nonprofit research institutions. IG is now preparing a detailed metabolic reconstruction, and we intend to publish and release our entire analysis.

    For now, we are making our preliminary estimates of the genes available to the community.


    Bacteriophage RB69

    In collaboration with Dr. Jim Karam (Tulane University) and Dr. Henry Krisch (CNRS, Toulouse, France).

    The sequencing project was supported by the National Science Foundation.

    We are making our updated estimates of the genes available to the community.


    Rhodobacter capsulatus SB1003

    Integrated Genomics (IG) is making the Rhodobacter capsulatus (SB1003) genome available free to nonprofit research institutions.

    For now, we are making our preliminary estimates of the genes available to the community.

       
     
       
       
     
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